PPP Input File GeneratorsΒΆ
For several programs that implement analyses of population genomic variation, PPP provides scripts to generate input files from VCF files.
- vcf_format_conversions.py: VCF to Plink/EIGENSTRAT
- vcf_to_ima.py: VCF to IMa Conversion Function
- vcf_to_treemix.py: VCF to treemix Conversion Function
- vcf_to_gphocs.py: VCF to GPhocs Conversion Function
- vcf_to_fastsimcoal.py: VCF to fastsimcoal Conversion Function
- vcf_to_dadi.py: VCF to dadi Conversion Function